medacy.pipelines.systematic_review_pipeline module

class medacy.pipelines.systematic_review_pipeline.SystematicReviewPipeline(metamap=None, entities=[])

Bases: medacy.pipelines.base.base_pipeline.BasePipeline

A pipeline for clinical named entity recognition. This pipeline was designed over-top of the TAC 2018 SRIE track challenge.

_abc_impl = <_abc_data object>

get_feature_extractor()

Returns an instant of FeatureExtractor with all configs set. :return: An instant of FeatureExtractor

get_learner()

Retrieves an instance of a sci-kit learn compatible learning algorithm. :return: model

get_tokenizer()

Returns an instance of a tokenizer :return: