medacy.pipelines.clinical_pipeline module

class medacy.pipelines.clinical_pipeline.ClinicalPipeline(metamap=None, entities=[])

Bases: medacy.pipelines.base.base_pipeline.BasePipeline

A pipeline for clinical named entity recognition. A special tokenizer that breaks down a clinical document to character level tokens defines this pipeline.

_abc_impl = <_abc_data object>

get_feature_extractor()

Returns an instant of FeatureExtractor with all configs set. :return: An instant of FeatureExtractor

get_learner()

Retrieves an instance of a sci-kit learn compatible learning algorithm. :return: model

get_tokenizer()

Returns an instance of a tokenizer :return: